Question:

Which amongst the following reagents is used for identification of N-terminal amino acid in a peptide chain?

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N-Terminal Labeling Reagents:
1. Sanger's Reagent = 2,4-Dinitrofluorobenzene (DNFB).
2. Edman's Reagent = Phenylisothiocyanate (PITC).
3. Dansyl Chloride.
  • Ninhydrin
  • Nitrous acid
  • Mercaptoethanol
  • 2,4-dinitro fluorobenzene (DNFB)
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The Correct Option is D

Solution and Explanation


Step 1: Understanding the Concept:

Frederick Sanger used 2,4-dinitrofluorobenzene (DNFB Sanger's reagent) to label and identify N-terminal amino acid residues during the landmark sequencing of insulin.
Key Formula or Approach:
\[ \text{DNFB} + \text{H}_2\text{N-Peptide} \xrightarrow{\text{Mild Alkali}} \text{DNP-Peptide} \xrightarrow{6\text{M HCl Hydrolysis}} \text{DNP-Amino Acid (Yellow, N-terminal)} + \text{Free Amino Acids} \]

Step 2: Detailed Explanation:

2,4-Dinitrofluorobenzene (DNFB Sanger's Reagent):
- Reacts with the free unprotonated $\alpha$-amino group of the N-terminal amino acid in a peptide under mildly alkaline conditions to form a stable, bright yellow dinitrophenyl (DNP) derivative.
- Subsequent complete acid hydrolysis ($6\text{M HCl}$) hydrolyzes all internal peptide bonds, but the covalent DNP-amino acid bond remains intact and is extracted into organic solvents and identified by chromatography.
- (Ninhydrin stains all free $\alpha$-amino acids; Mercaptoethanol cleaves disulfide bonds).

Step 3: Final Answer:

Hence, Sanger's reagent (DNFB) is used for N-terminal identification, corresponding to option (D).
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