Step 1:
Samkhya philosophy was founded by Kapila, while Yoga philosophy is associated with Patanjali.
Step 2:
Nyaya philosophy was founded by:
\[
\boxed{\text{Gautama}}
\]
Step 3:
Vaisheshika philosophy is associated with:
\[
\boxed{\text{Kanada}}
\]
Step 4:
Hence, the correct sequence is:
\[
A-II,\; B-III,\; C-IV,\; D-I
\]
Thus, the correct answer is:
\[
\boxed{\text{(3)}}
\]