Step 1: Concept
This is a combinatorial problem where we need to find the number of ways to pair 4 distinct Cysteine (Cys) residues to form 2 disulfide bonds.
Step 2: Analysis
Let the residues be 1, 2, 3, and 4.
If residue 1 pairs with 2, the remaining pair must be 3-4.
If residue 1 pairs with 3, the remaining pair must be 2-4.
If residue 1 pairs with 4, the remaining pair must be 2-3.
Step 3: Calculation
The formula for pairing $n$ items is $(n-1)!!$. For $n=4$, it is $(4-1)!! = 3 \times 1 = 3$.
Step 4: Conclusion
There are exactly 3 unique ways to form two disulfide bonds from four Cys residues.
Final Answer: (A)