Step 1: Understanding the Concept:
The second step of the Krebs tricarboxylic acid (TCA) cycle is the stereospecific isomerization of symmetric citrate to asymmetric D-isocitrate.
Key Formula or Approach:
\[ \text{Citrate} \xrightleftharpoons[-\text{H}_2\text{O}]{\text{Aconitase}} \text{cis-Aconitate} \xrightleftharpoons[+\text{H}_2\text{O}]{\text{Aconitase}} \text{D-Isocitrate} \]
Step 2: Detailed Explanation:
In the TCA cycle:
- Aconitase (Aconitate hydratase) contains a catalytic $[4\text{Fe}-4\text{S}]$ iron-sulfur cluster.
- It catalyzes a reversible two-step isomerization: first dehydrating tertiary alcohol citrate to enzyme-bound cis-aconitate intermediate, followed by stereospecific rehydration to form the secondary alcohol D-isocitrate, setting up the substrate for oxidative decarboxylation.
Step 3: Final Answer:
Thus, citrate is isomerized to isocitrate by Aconitase, corresponding to option (B).